J3_5T7V_016

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

5T7V|1|B|A|2545, 5T7V|1|B|A|2591

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5T7V_016 not in the Motif Atlas

Homologous match to J3_4WF9_009

Geometric discrepancy: 0.1427

The information below is about J3_4WF9_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

5T7V|1|B|C|2544
5T7V|1|B|A|2545
5T7V|1|B|U|2546
5T7V|1|B|C|2547
*
5T7V|1|B|G|2572
5T7V|1|B|U|2573
5T7V|1|B|U|2574
*
5T7V|1|B|A|2588
5T7V|1|B|U|2589
5T7V|1|B|U|2590
5T7V|1|B|A|2591
5T7V|1|B|A|2592
5T7V|1|B|A|2593
5T7V|1|B|G|2594

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LN

50S ribosomal protein L14