J3_5TCU_007

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGACAAC*GCCUUC*GACA

Length

17 nucleotides

Bulged bases

5TCU|1|A|A|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|U|1012
5TCU|1|A|G|1013
5TCU|1|A|A|1014
5TCU|1|A|C|1015
5TCU|1|A|A|1016
5TCU|1|A|A|1017
5TCU|1|A|C|1018
*
5TCU|1|A|G|1031
5TCU|1|A|C|1032
5TCU|1|A|C|1033
5TCU|1|A|U|1034
5TCU|1|A|U|1035
5TCU|1|A|C|1036
*
5TCU|1|A|G|1047
5TCU|1|A|A|1048
5TCU|1|A|C|1049
5TCU|1|A|A|1050

Current chains

Chain A

16S RRNA

Nearby chains

Chain S5

30S ribosomal protein S14 type Z

Chain SB

30S ribosomal protein S3