J3_5TCU_009

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGU*AUGUUG*CGCAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|U|1085
5TCU|1|A|G|1086
5TCU|1|A|U|1087
*
5TCU|1|A|A|1094
5TCU|1|A|U|1095
5TCU|1|A|G|1096
5TCU|1|A|U|1097
5TCU|1|A|U|1098
5TCU|1|A|G|1099
*
5TCU|1|A|C|1110
5TCU|1|A|G|1111
5TCU|1|A|C|1112
5TCU|1|A|A|1113
5TCU|1|A|A|1114

Current chains

Chain A

16S RRNA

Nearby chains

Chain SD

30S ribosomal protein S5