J3_5TCU_013
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGAUCUAC*GUAGCG*CAAUCGAAC
- Length
- 24 nucleotides
- Bulged bases
- 5TCU|1|B|C|821, 5TCU|1|B|A|834, 5TCU|1|B|G|837, 5TCU|1|B|A|838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|G|727
5TCU|1|B|U|728
5TCU|1|B|G|729
5TCU|1|B|A|730
5TCU|1|B|U|731
5TCU|1|B|C|732
5TCU|1|B|U|733
5TCU|1|B|A|734
5TCU|1|B|C|735
*
5TCU|1|B|G|817
5TCU|1|B|U|818
5TCU|1|B|A|819
5TCU|1|B|G|820
5TCU|1|B|C|821
5TCU|1|B|G|822
*
5TCU|1|B|C|832
5TCU|1|B|A|833
5TCU|1|B|A|834
5TCU|1|B|U|835
5TCU|1|B|C|836
5TCU|1|B|G|837
5TCU|1|B|A|838
5TCU|1|B|A|839
5TCU|1|B|C|840
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L2
- 50S ribosomal protein L2
- Chain L5
- 50S ribosomal protein L22
- Chain LG
- 50S ribosomal protein L34
- Chain LJ
- 50S ribosomal protein L4
Coloring options: