J3_5TCU_017

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUUC*GGUUAGUC*GUAC

Length

17 nucleotides

Bulged bases

5TCU|1|B|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|1347
5TCU|1|B|U|1348
5TCU|1|B|U|1349
5TCU|1|B|U|1350
5TCU|1|B|C|1351
*
5TCU|1|B|G|1375
5TCU|1|B|G|1376
5TCU|1|B|U|1377
5TCU|1|B|U|1378
5TCU|1|B|A|1379
5TCU|1|B|G|1380
5TCU|1|B|U|1381
5TCU|1|B|C|1382
*
5TCU|1|B|G|1645
5TCU|1|B|U|1646
5TCU|1|B|A|1647
5TCU|1|B|C|1648

Current chains

Chain B

23S RRNA

Nearby chains

Chain L6

50S ribosomal protein L23

Chain LG

50S ribosomal protein L34