J3_5TCU_019

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUC*GAG*CAUAAGG

Length

14 nucleotides

Bulged bases

5TCU|1|B|U|2361, 5TCU|1|B|A|2363

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|C|2321
5TCU|1|B|C|2322
5TCU|1|B|U|2323
5TCU|1|B|C|2324
*
5TCU|1|B|G|2348
5TCU|1|B|A|2349
5TCU|1|B|G|2350
*
5TCU|1|B|C|2359
5TCU|1|B|A|2360
5TCU|1|B|U|2361
5TCU|1|B|A|2362
5TCU|1|B|A|2363
5TCU|1|B|G|2364
5TCU|1|B|G|2365

Current chains

Chain B

23S RRNA

Nearby chains

Chain C

5S ribosomal RNA; 5S rRNA

Chain E

Transfer RNA; tRNA

Chain L9

50S ribosomal protein L27

Chain LK

50S ribosomal protein L5

Chain LR

50S ribosomal protein L18