J3_5TCU_025

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UG*CACCAGUGGC*GCGA

Length

16 nucleotides

Bulged bases

5TCU|1|A|U|731

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|U|680
5TCU|1|A|G|681
*
5TCU|1|A|C|725
5TCU|1|A|A|726
5TCU|1|A|C|727
5TCU|1|A|C|728
5TCU|1|A|A|729
5TCU|1|A|G|730
5TCU|1|A|U|731
5TCU|1|A|G|732
5TCU|1|A|G|733
5TCU|1|A|C|734
*
5TCU|1|A|G|739
5TCU|1|A|C|740
5TCU|1|A|G|741
5TCU|1|A|A|742

Current chains

Chain A

16S RRNA

Nearby chains

Chain S2

30S ribosomal protein S11

Chain S6

30S ribosomal protein S15

Chain S9

30S ribosomal protein S18

Chain SE

30S ribosomal protein S6