J3_5TCU_027
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGUUUAAUUC*GAAGAACCUUAC*GGCUACAC
- Length
- 30 nucleotides
- Bulged bases
- 5TCU|1|A|U|967, 5TCU|1|A|A|985, 5TCU|1|A|G|986
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|A|G|963
5TCU|1|A|G|964
5TCU|1|A|U|965
5TCU|1|A|U|966
5TCU|1|A|U|967
5TCU|1|A|A|968
5TCU|1|A|A|969
5TCU|1|A|U|970
5TCU|1|A|U|971
5TCU|1|A|C|972
*
5TCU|1|A|G|983
5TCU|1|A|A|984
5TCU|1|A|A|985
5TCU|1|A|G|986
5TCU|1|A|A|987
5TCU|1|A|A|988
5TCU|1|A|C|989
5TCU|1|A|C|990
5TCU|1|A|U|991
5TCU|1|A|U|992
5TCU|1|A|A|993
5TCU|1|A|C|994
*
5TCU|1|A|G|1232
5TCU|1|A|G|1233
5TCU|1|A|C|1234
5TCU|1|A|U|1235
5TCU|1|A|A|1236
5TCU|1|A|C|1237
5TCU|1|A|A|1238
5TCU|1|A|C|1239
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain E
- Transfer RNA; tRNA
- Chain S1
- 30S ribosomal protein S10
- Chain S4
- 30S ribosomal protein S13
- Chain S5
- 30S ribosomal protein S14 type Z
- Chain SI
- 30S ribosomal protein S19
Coloring options: