J3_5TCU_030
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGUGGAUGC*GUGAAAAGCAC*GAGUGAAAUAGAACCUGAAACCG
- Length
- 44 nucleotides
- Bulged bases
- 5TCU|1|B|U|549, 5TCU|1|B|A|553
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|C|22
5TCU|1|B|G|23
5TCU|1|B|G|24
5TCU|1|B|U|25
5TCU|1|B|G|26
5TCU|1|B|G|27
5TCU|1|B|A|28
5TCU|1|B|U|29
5TCU|1|B|G|30
5TCU|1|B|C|31
*
5TCU|1|B|G|520
5TCU|1|B|U|521
5TCU|1|B|G|522
5TCU|1|B|A|523
5TCU|1|B|A|524
5TCU|1|B|A|525
5TCU|1|B|A|526
5TCU|1|B|G|527
5TCU|1|B|C|528
5TCU|1|B|A|529
5TCU|1|B|C|530
*
5TCU|1|B|G|541
5TCU|1|B|A|542
5TCU|1|B|G|543
5TCU|1|B|U|544
5TCU|1|B|G|545
5TCU|1|B|A|546
5TCU|1|B|A|547
5TCU|1|B|A|548
5TCU|1|B|U|549
5TCU|1|B|A|550
5TCU|1|B|G|551
5TCU|1|B|A|552
5TCU|1|B|A|553
5TCU|1|B|C|554
5TCU|1|B|C|555
5TCU|1|B|U|556
5TCU|1|B|G|557
5TCU|1|B|A|558
5TCU|1|B|A|559
5TCU|1|B|A|560
5TCU|1|B|C|561
5TCU|1|B|C|562
5TCU|1|B|G|563
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L3
- 50S ribosomal protein L20
- Chain L5
- 50S ribosomal protein L22
- Chain L7
- 50S ribosomal protein L24
- Chain LE
- 50S ribosomal protein L32
Coloring options: