J3_5TCU_033

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GACGAAU*AAUCAAAGAA*UGUAGUC

Length

24 nucleotides

Bulged bases

5TCU|1|B|A|364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|338
5TCU|1|B|A|339
5TCU|1|B|C|340
5TCU|1|B|G|341
5TCU|1|B|A|342
5TCU|1|B|A|343
5TCU|1|B|U|344
*
5TCU|1|B|A|359
5TCU|1|B|A|360
5TCU|1|B|U|361
5TCU|1|B|C|362
5TCU|1|B|A|363
5TCU|1|B|A|364
5TCU|1|B|A|365
5TCU|1|B|G|366
5TCU|1|B|A|367
5TCU|1|B|A|368
*
5TCU|1|B|U|380
5TCU|1|B|G|381
5TCU|1|B|U|382
5TCU|1|B|A|383
5TCU|1|B|G|384
5TCU|1|B|U|385
5TCU|1|B|C|386

Current chains

Chain B

23S RRNA

Nearby chains

Chain L7

50S ribosomal protein L24

Chain LJ

50S ribosomal protein L4