J3_5TCU_034

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCAAGGU*GCCGUAGCGAAAGCGAGU*GCGUUUAGU

Length

34 nucleotides

Bulged bases

5TCU|1|B|U|699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|643
5TCU|1|B|C|644
5TCU|1|B|A|645
5TCU|1|B|A|646
5TCU|1|B|G|647
5TCU|1|B|G|648
5TCU|1|B|U|649
*
5TCU|1|B|G|667
5TCU|1|B|C|668
5TCU|1|B|C|669
5TCU|1|B|G|670
5TCU|1|B|U|671
5TCU|1|B|A|672
5TCU|1|B|G|673
5TCU|1|B|C|674
5TCU|1|B|G|675
5TCU|1|B|A|676
5TCU|1|B|A|677
5TCU|1|B|A|678
5TCU|1|B|G|679
5TCU|1|B|C|680
5TCU|1|B|G|681
5TCU|1|B|A|682
5TCU|1|B|G|683
5TCU|1|B|U|684
*
5TCU|1|B|G|694
5TCU|1|B|C|695
5TCU|1|B|G|696
5TCU|1|B|U|697
5TCU|1|B|U|698
5TCU|1|B|U|699
5TCU|1|B|A|700
5TCU|1|B|G|701
5TCU|1|B|U|702

Current chains

Chain B

23S RRNA

Nearby chains

Chain LH

50S ribosomal protein L35

Chain LJ

50S ribosomal protein L4

Chain LO

50S ribosomal protein L15