J3_5TCU_050

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGUCAGGUUGAAG*UGGAGGACCGAAC*GAUGAACUG

Length

36 nucleotides

Bulged bases

5TCU|1|B|G|774, 5TCU|1|B|A|809

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|U|739
5TCU|1|B|G|740
5TCU|1|B|G|741
5TCU|1|B|U|742
5TCU|1|B|C|743
5TCU|1|B|A|744
5TCU|1|B|G|745
5TCU|1|B|G|746
5TCU|1|B|U|747
5TCU|1|B|U|748
5TCU|1|B|G|749
5TCU|1|B|A|750
5TCU|1|B|A|751
5TCU|1|B|G|752
*
5TCU|1|B|U|769
5TCU|1|B|G|770
5TCU|1|B|G|771
5TCU|1|B|A|772
5TCU|1|B|G|773
5TCU|1|B|G|774
5TCU|1|B|A|775
5TCU|1|B|C|776
5TCU|1|B|C|777
5TCU|1|B|G|778
5TCU|1|B|A|779
5TCU|1|B|A|780
5TCU|1|B|C|781
*
5TCU|1|B|G|805
5TCU|1|B|A|806
5TCU|1|B|U|807
5TCU|1|B|G|808
5TCU|1|B|A|809
5TCU|1|B|A|810
5TCU|1|B|C|811
5TCU|1|B|U|812
5TCU|1|B|G|813

Current chains

Chain B

23S RRNA

Nearby chains

Chain L2

50S ribosomal protein L2

Chain LG

50S ribosomal protein L34