J3_5U4I_033
3D structure
- PDB id
- 5U4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 5U4I|1|a|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5U4I_033 not in the Motif Atlas
- Homologous match to J3_5J7L_053
- Geometric discrepancy: 0.1962
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
5U4I|1|a|C|990
5U4I|1|a|U|991
5U4I|1|a|U|992
5U4I|1|a|G|993
5U4I|1|a|A|994
5U4I|1|a|C|995
5U4I|1|a|A|996
5U4I|1|a|U|997
*
5U4I|1|a|A|1044
5U4I|1|a|C|1045
5U4I|1|a|A|1046
5U4I|1|a|G|1047
*
5U4I|1|a|C|1210
5U4I|1|a|U|1211
5U4I|1|a|U|1212
5U4I|1|a|A|1213
5U4I|1|a|C|1214
5U4I|1|a|G|1215
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S14
- Chain v
- Peptide chain release factor 2
Coloring options: