J3_5U4I_034

3D structure

PDB id

5U4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAAGUUU*GAAUGUGCCU*GGAACC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5U4I|1|a|G|1002
5U4I|1|a|G|1003
5U4I|1|a|A|1004
5U4I|1|a|A|1005
5U4I|1|a|G|1006
5U4I|1|a|U|1007
5U4I|1|a|U|1008
5U4I|1|a|U|1009
*
5U4I|1|a|G|1020
5U4I|1|a|A|1021
5U4I|1|a|A|1022
5U4I|1|a|U|1023
5U4I|1|a|G|1024
5U4I|1|a|U|1025
5U4I|1|a|G|1026
5U4I|1|a|C|1027
5U4I|1|a|C|1028
5U4I|1|a|U|1029
*
5U4I|1|a|G|1033
5U4I|1|a|G|1034
5U4I|1|a|A|1035
5U4I|1|a|A|1036
5U4I|1|a|C|1037
5U4I|1|a|C|1038

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14