J3_5UZ4_010

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GUGU*AUGUUG*CGCAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|G|1072
5UZ4|1|A|U|1073
5UZ4|1|A|G|1074
5UZ4|1|A|U|1075
*
5UZ4|1|A|A|1082
5UZ4|1|A|U|1083
5UZ4|1|A|G|1084
5UZ4|1|A|U|1085
5UZ4|1|A|U|1086
5UZ4|1|A|G|1087
*
5UZ4|1|A|C|1098
5UZ4|1|A|G|1099
5UZ4|1|A|C|1100
5UZ4|1|A|A|1101
5UZ4|1|A|A|1102
5UZ4|1|A|C|1103

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain B

30S ribosomal protein S2

Chain E

30S ribosomal protein S5