J3_5V7Q_003

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAGG*CCGAAC*GAUG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|C|827
5V7Q|1|A|A|828
5V7Q|1|A|G|829
5V7Q|1|A|G|830
*
5V7Q|1|A|C|860
5V7Q|1|A|C|861
5V7Q|1|A|G|862
5V7Q|1|A|A|863
5V7Q|1|A|A|864
5V7Q|1|A|C|865
*
5V7Q|1|A|G|889
5V7Q|1|A|A|890
5V7Q|1|A|U|891
5V7Q|1|A|G|892

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2