J3_5V7Q_004

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAGGAG*CUUGAAAGAGUG*CUCACUG

Length

25 nucleotides

Bulged bases

5V7Q|1|A|A|1217

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|C|1182
5V7Q|1|A|A|1183
5V7Q|1|A|G|1184
5V7Q|1|A|G|1185
5V7Q|1|A|A|1186
5V7Q|1|A|G|1187
*
5V7Q|1|A|C|1209
5V7Q|1|A|U|1210
5V7Q|1|A|U|1211
5V7Q|1|A|G|1212
5V7Q|1|A|A|1213
5V7Q|1|A|A|1214
5V7Q|1|A|A|1215
5V7Q|1|A|G|1216
5V7Q|1|A|A|1217
5V7Q|1|A|G|1218
5V7Q|1|A|U|1219
5V7Q|1|A|G|1220
*
5V7Q|1|A|C|1229
5V7Q|1|A|U|1230
5V7Q|1|A|C|1231
5V7Q|1|A|A|1232
5V7Q|1|A|C|1233
5V7Q|1|A|U|1234
5V7Q|1|A|G|1235

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6