J3_5V7Q_024

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGGAUAUGU*AG*CUAGUAUCAAUU

Length

23 nucleotides

Bulged bases

5V7Q|1|A|U|445, 5V7Q|1|A|A|446

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|A|323
5V7Q|1|A|G|324
5V7Q|1|A|G|325
5V7Q|1|A|A|326
5V7Q|1|A|U|327
5V7Q|1|A|A|328
5V7Q|1|A|U|329
5V7Q|1|A|G|330
5V7Q|1|A|U|331
*
5V7Q|1|A|A|352
5V7Q|1|A|G|353
*
5V7Q|1|A|C|444
5V7Q|1|A|U|445
5V7Q|1|A|A|446
5V7Q|1|A|G|447
5V7Q|1|A|U|448
5V7Q|1|A|A|449
5V7Q|1|A|U|450
5V7Q|1|A|C|451
5V7Q|1|A|A|452
5V7Q|1|A|A|453
5V7Q|1|A|U|454
5V7Q|1|A|U|455

Current chains

Chain A

23S rRNA

Nearby chains