J3_5VYC_059
3D structure
- PDB id
- 5VYC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- AGAGU*GCAG*CUGGAU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VYC|1|i2|A|816
5VYC|1|i2|G|817
5VYC|1|i2|A|818
5VYC|1|i2|G|819
5VYC|1|i2|U|820
*
5VYC|1|i2|G|828
5VYC|1|i2|C|829
5VYC|1|i2|A|830
5VYC|1|i2|G|831
*
5VYC|1|i2|C|843
5VYC|1|i2|U|844
5VYC|1|i2|G|845
5VYC|1|i2|G|846
5VYC|1|i2|A|847
5VYC|1|i2|U|848
Current chains
- Chain i2
- Human 18S ribosomal RNA
Nearby chains
- Chain E2
- 40S ribosomal protein S4, X isoform
- Chain J2
- 40S ribosomal protein S9
- Chain Y2
- 40S ribosomal protein S24
Coloring options: