J3_5VYC_063
3D structure
- PDB id
- 5VYC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- CUGGC*GGACAAGU*ACCCGAGAUUG
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VYC|1|i2|C|1391
5VYC|1|i2|U|1392
5VYC|1|i2|G|1393
5VYC|1|i2|G|1394
5VYC|1|i2|C|1395
*
5VYC|1|i2|G|1450
5VYC|1|i2|G|1451
5VYC|1|i2|A|1452
5VYC|1|i2|C|1453
5VYC|1|i2|A|1454
5VYC|1|i2|A|1455
5VYC|1|i2|G|1456
5VYC|1|i2|U|1457
*
5VYC|1|i2|A|1469
5VYC|1|i2|C|1470
5VYC|1|i2|C|1471
5VYC|1|i2|C|1472
5VYC|1|i2|G|1473
5VYC|1|i2|A|1474
5VYC|1|i2|G|1475
5VYC|1|i2|A|1476
5VYC|1|i2|U|1477
5VYC|1|i2|U|1478
5VYC|1|i2|G|1479
Current chains
- Chain i2
- Human 18S ribosomal RNA
Nearby chains
- Chain D2
- 40S ribosomal protein S3
- Chain F2
- 40S ribosomal protein S5
- Chain Q2
- 40S ribosomal protein S16
- Chain R2
- 40S ribosomal protein S17
- Chain U2
- 40S ribosomal protein S20
- Chain d2
- 40S ribosomal protein S29
- Chain g2
- Receptor of activated protein C kinase 1
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