J3_5WFS_020

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

5WFS|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5WFS_020 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1333

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

5WFS|1|a|C|990
5WFS|1|a|U|991
5WFS|1|a|U|992
5WFS|1|a|G|993
*
5WFS|1|a|C|1045
5WFS|1|a|A|1046
5WFS|1|a|G|1047
*
5WFS|1|a|C|1210
5WFS|1|a|U|1211
5WFS|1|a|U|1212
5WFS|1|a|A|1213
5WFS|1|a|C|1214
5WFS|1|a|G|1215

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14