J3_5WIS_057
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5WIS_057 not in the Motif Atlas
- Homologous match to J3_9DFE_013
- Geometric discrepancy: 0.0638
- The information below is about J3_9DFE_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.3
- Basepair signature
- cWW-tSH-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
5WIS|1|1A|G|1470
5WIS|1|1A|G|1471
5WIS|1|1A|G|1472
5WIS|1|1A|A|1473
5WIS|1|1A|C|1474
5WIS|1|1A|G|1475
*
5WIS|1|1A|C|1611
5WIS|1|1A|C|1612
*
5WIS|1|1A|G|1615
5WIS|1|1A|A|1616
5WIS|1|1A|A|1617
5WIS|1|1A|A|1618
5WIS|1|1A|A|1619
5WIS|1|1A|G|1620
5WIS|1|1A|C|1621
Current chains
- Chain 1A
- 23S ribosomal RNA
Nearby chains
- Chain 1D
- 50S ribosomal protein L2
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