J3_5ZLU_014

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAGCUA*UAGGA*UAACCGAG

Length

20 nucleotides

Bulged bases

5ZLU|1|V|G|686, 5ZLU|1|V|A|788, 5ZLU|1|V|A|789, 5ZLU|1|V|C|790, 5ZLU|1|V|G|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|683
5ZLU|1|V|G|684
5ZLU|1|V|A|685
5ZLU|1|V|G|686
5ZLU|1|V|C|687
5ZLU|1|V|U|688
5ZLU|1|V|A|689
*
5ZLU|1|V|U|773
5ZLU|1|V|A|774
5ZLU|1|V|G|775
5ZLU|1|V|G|776
5ZLU|1|V|A|777
*
5ZLU|1|V|U|787
5ZLU|1|V|A|788
5ZLU|1|V|A|789
5ZLU|1|V|C|790
5ZLU|1|V|C|791
5ZLU|1|V|G|792
5ZLU|1|V|A|793
5ZLU|1|V|G|794

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L2

Chain b

50S ribosomal protein L4

Chain p

50S ribosomal protein L22

Chain z

50S ribosomal protein L34