J3_5ZLU_031

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUCGGC*GACCGAUAGCGCACCAGUAC*GGAAAG

Length

32 nucleotides

Bulged bases

5ZLU|1|V|C|34, 5ZLU|1|V|A|443, 5ZLU|1|V|U|448, 5ZLU|1|V|C|455, 5ZLU|1|V|C|456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|32
5ZLU|1|V|U|33
5ZLU|1|V|C|34
5ZLU|1|V|G|35
5ZLU|1|V|G|36
5ZLU|1|V|C|37
*
5ZLU|1|V|G|442
5ZLU|1|V|A|443
5ZLU|1|V|C|444
5ZLU|1|V|C|445
5ZLU|1|V|G|446
5ZLU|1|V|A|447
5ZLU|1|V|U|448
5ZLU|1|V|A|449
5ZLU|1|V|G|450
5ZLU|1|V|C|451
5ZLU|1|V|G|452
5ZLU|1|V|C|453
5ZLU|1|V|A|454
5ZLU|1|V|C|455
5ZLU|1|V|C|456
5ZLU|1|V|A|457
5ZLU|1|V|G|458
5ZLU|1|V|U|459
5ZLU|1|V|A|460
5ZLU|1|V|C|461
*
5ZLU|1|V|G|468
5ZLU|1|V|G|469
5ZLU|1|V|A|470
5ZLU|1|V|A|471
5ZLU|1|V|A|472
5ZLU|1|V|G|473

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L4

Chain n

50S ribosomal protein L20

Chain q

50S ribosomal protein L23

Chain z

50S ribosomal protein L34