J3_5ZLU_036

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGGAGGUUGGC*GCCAUCCUUUAAAGAGUG*CUCACUGG

Length

38 nucleotides

Bulged bases

5ZLU|1|V|G|1056, 5ZLU|1|V|G|1059, 5ZLU|1|V|U|1061, 5ZLU|1|V|U|1078, 5ZLU|1|V|A|1088, 5ZLU|1|V|U|1105

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|1053
5ZLU|1|V|A|1054
5ZLU|1|V|G|1055
5ZLU|1|V|G|1056
5ZLU|1|V|A|1057
5ZLU|1|V|G|1058
5ZLU|1|V|G|1059
5ZLU|1|V|U|1060
5ZLU|1|V|U|1061
5ZLU|1|V|G|1062
5ZLU|1|V|G|1063
5ZLU|1|V|C|1064
*
5ZLU|1|V|G|1074
5ZLU|1|V|C|1075
5ZLU|1|V|C|1076
5ZLU|1|V|A|1077
5ZLU|1|V|U|1078
5ZLU|1|V|C|1079
5ZLU|1|V|C|1080
5ZLU|1|V|U|1081
5ZLU|1|V|U|1082
5ZLU|1|V|U|1083
5ZLU|1|V|A|1084
5ZLU|1|V|A|1085
5ZLU|1|V|A|1086
5ZLU|1|V|G|1087
5ZLU|1|V|A|1088
5ZLU|1|V|G|1089
5ZLU|1|V|U|1090
5ZLU|1|V|G|1091
*
5ZLU|1|V|C|1100
5ZLU|1|V|U|1101
5ZLU|1|V|C|1102
5ZLU|1|V|A|1103
5ZLU|1|V|C|1104
5ZLU|1|V|U|1105
5ZLU|1|V|G|1106
5ZLU|1|V|G|1107

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain BB

50S ribosomal protein L36

Chain d

50S ribosomal protein L6

Chain e

50S ribosomal protein L10

Chain f

50S ribosomal protein L11