3D structure

PDB id
6AWC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
7.9 Å

Loop

Sequence
UAGAAUU*AGGAAUACCGGUGG*CGG
Length
24 nucleotides
Bulged bases
6AWC|1|A|U|723
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6AWC|1|A|U|672
6AWC|1|A|A|673
6AWC|1|A|G|674
6AWC|1|A|A|675
6AWC|1|A|A|676
6AWC|1|A|U|677
6AWC|1|A|U|678
*
6AWC|1|A|A|712
6AWC|1|A|G|713
6AWC|1|A|G|714
6AWC|1|A|A|715
6AWC|1|A|A|716
6AWC|1|A|U|717
6AWC|1|A|A|718
6AWC|1|A|C|719
6AWC|1|A|C|720
6AWC|1|A|G|721
6AWC|1|A|G|722
6AWC|1|A|U|723
6AWC|1|A|G|724
6AWC|1|A|G|725
*
6AWC|1|A|C|732
6AWC|1|A|G|733
6AWC|1|A|G|734

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
30S ribosomal protein S6
Chain N
30S ribosomal protein S11
Chain U
30S ribosomal protein S18
Chain X
30S ribosomal protein S21

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1069 s