J3_6AZ1_004

3D structure

PDB id

6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AC*GAACUACAG*CAU

Length

14 nucleotides

Bulged bases

6AZ1|1|1|C|1181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AZ1|1|1|A|1130
6AZ1|1|1|C|1131
*
6AZ1|1|1|G|1175
6AZ1|1|1|A|1176
6AZ1|1|1|A|1177
6AZ1|1|1|C|1178
6AZ1|1|1|U|1179
6AZ1|1|1|A|1180
6AZ1|1|1|C|1181
6AZ1|1|1|A|1182
6AZ1|1|1|G|1183
*
6AZ1|1|1|C|1190
6AZ1|1|1|A|1191
6AZ1|1|1|U|1192

Current chains

Chain 1

ribosomal RNA 18S

Nearby chains

Chain A

Ribosomal protein s1e

Chain O

ribosomal protein S11

Chain T

ribosomal protein S15

Chain b

ribosomal protein S26e