J3_6AZ1_005
3D structure
- PDB id
- 6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCAUGAAU*GUUUUCACG*CUUUGAG
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AZ1|1|1|C|1284
6AZ1|1|1|C|1285
6AZ1|1|1|A|1286
6AZ1|1|1|U|1287
6AZ1|1|1|G|1288
6AZ1|1|1|A|1289
6AZ1|1|1|A|1290
6AZ1|1|1|U|1291
*
6AZ1|1|1|G|1423
6AZ1|1|1|U|1424
6AZ1|1|1|U|1425
6AZ1|1|1|U|1426
6AZ1|1|1|U|1427
6AZ1|1|1|C|1430
6AZ1|1|1|A|1431
6AZ1|1|1|C|1432
6AZ1|1|1|G|1433
*
6AZ1|1|1|C|1440
6AZ1|1|1|U|1441
6AZ1|1|1|U|1442
6AZ1|1|1|U|1443
6AZ1|1|1|G|1444
6AZ1|1|1|A|1445
6AZ1|1|1|G|1446
Current chains
- Chain 1
- ribosomal RNA 18S
Nearby chains
- Chain A
- Ribosomal protein s1e
- Chain B
- ribosomal protein S2
- Chain J
- ribosomal protein S8
- Chain P
- ribosomal protein S12
- Chain T
- ribosomal protein S15
- Chain Y
- ribosomal protein S21e
- Chain b
- ribosomal protein S26e
- Chain c
- ribosomal protein S27e
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