J3_6AZ1_016
3D structure
- PDB id
- 6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAA*UGAAGGAG*UCCUCA
- Length
- 18 nucleotides
- Bulged bases
- 6AZ1|1|1|G|1110
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AZ1|1|1|U|682
6AZ1|1|1|G|683
6AZ1|1|1|A|684
6AZ1|1|1|A|685
*
6AZ1|1|1|U|1106
6AZ1|1|1|G|1107
6AZ1|1|1|A|1108
6AZ1|1|1|A|1109
6AZ1|1|1|G|1110
6AZ1|1|1|G|1111
6AZ1|1|1|A|1112
6AZ1|1|1|G|1113
*
6AZ1|1|1|U|1208
6AZ1|1|1|C|1209
6AZ1|1|1|C|1210
6AZ1|1|1|U|1211
6AZ1|1|1|C|1212
6AZ1|1|1|A|1213
Current chains
- Chain 1
- ribosomal RNA 18S
Nearby chains
- Chain I
- ribosomal protein S7e
- Chain J
- ribosomal protein S8
- Chain P
- ribosomal protein S12
- Chain T
- ribosomal protein S15
- Chain U
- ribosomal protein S17
- Chain c
- ribosomal protein S27e
Coloring options: