J3_6BOH_054
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUACCAG*CUGGGCGAC
- Length
- 33 nucleotides
- Bulged bases
- 6BOH|1|A|A|975, 6BOH|1|A|G|976, 6BOH|1|A|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BOH|1|A|G|954
6BOH|1|A|U|955
6BOH|1|A|U|956
6BOH|1|A|U|957
6BOH|1|A|A|958
6BOH|1|A|A|959
6BOH|1|A|U|960
6BOH|1|A|U|961
6BOH|1|A|C|962
*
6BOH|1|A|G|973
6BOH|1|A|A|974
6BOH|1|A|A|975
6BOH|1|A|G|976
6BOH|1|A|A|977
6BOH|1|A|A|978
6BOH|1|A|C|979
6BOH|1|A|C|980
6BOH|1|A|U|981
6BOH|1|A|U|982
6BOH|1|A|A|983
6BOH|1|A|C|984
6BOH|1|A|C|985
6BOH|1|A|A|986
6BOH|1|A|G|987
*
6BOH|1|A|C|1218
6BOH|1|A|U|1219
6BOH|1|A|G|1220
6BOH|1|A|G|1221
6BOH|1|A|G|1222
6BOH|1|A|C|1223
6BOH|1|A|G|1224
6BOH|1|A|A|1225
6BOH|1|A|C|1226
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain CB
- 30S ribosomal protein S19
- Chain JA
- Peptide chain release factor 1
- Chain KA
- Peptide chain release factor 1
- Chain TA
- 30S ribosomal protein S10
- Chain WA
- 30S ribosomal protein S13
- Chain XA
- 30S ribosomal protein S14 type Z
Coloring options: