J3_6BOK_013
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GC*GUGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_013 not in the Motif Atlas
- Homologous match to J3_7RQB_001
- Geometric discrepancy: 0.0725
- The information below is about J3_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_65070.3
- Basepair signature
- cWW-tWH-cWW-tSH-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6BOK|1|B|G|30
6BOK|1|B|C|31
*
6BOK|1|B|G|474
6BOK|1|B|U|475
6BOK|1|B|G|476
6BOK|1|B|A|477
6BOK|1|B|A|478
6BOK|1|B|A|479
6BOK|1|B|A|480
6BOK|1|B|G|481
*
6BOK|1|B|C|509
6BOK|1|B|C|510
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L24
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