J3_6BOK_020
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GCGGGAC*GGCAG*CC
- Length
- 14 nucleotides
- Bulged bases
- 6BOK|1|B|A|1384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_020 not in the Motif Atlas
- Homologous match to J3_7RQB_009
- Geometric discrepancy: 0.0807
- The information below is about J3_7RQB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04858.2
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
6BOK|1|B|G|1344
6BOK|1|B|C|1345
6BOK|1|B|G|1346
6BOK|1|B|G|1347
6BOK|1|B|G|1348
6BOK|1|B|A|1349
6BOK|1|B|C|1350
*
6BOK|1|B|G|1381
6BOK|1|B|G|1382
6BOK|1|B|C|1383
6BOK|1|B|A|1384
6BOK|1|B|G|1385
*
6BOK|1|B|C|1402
6BOK|1|B|C|1403
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L23
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