J3_6BOK_023
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 6BOK|1|B|A|2518, 6BOK|1|B|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_023 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.0549
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6BOK|1|B|C|2517
6BOK|1|B|A|2518
6BOK|1|B|U|2519
6BOK|1|B|C|2520
*
6BOK|1|B|G|2545
6BOK|1|B|U|2546
6BOK|1|B|U|2547
*
6BOK|1|B|A|2561
6BOK|1|B|U|2562
6BOK|1|B|U|2563
6BOK|1|B|A|2564
6BOK|1|B|A|2565
6BOK|1|B|A|2566
6BOK|1|B|G|2567
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L13
- Chain L
- 50S ribosomal protein L14
Coloring options: