J3_6BOK_028
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 6BOK|1|DB|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_028 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.1047
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6BOK|1|DB|U|672
6BOK|1|DB|G|673
*
6BOK|1|DB|C|717
6BOK|1|DB|G|718
6BOK|1|DB|C|719
6BOK|1|DB|C|720
6BOK|1|DB|G|721
6BOK|1|DB|A|722
6BOK|1|DB|U|723
6BOK|1|DB|G|724
6BOK|1|DB|G|725
*
6BOK|1|DB|C|732
6BOK|1|DB|A|733
6BOK|1|DB|G|734
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain CD
- 30S ribosomal protein S18
- Chain QC
- 30S ribosomal protein S6
- Chain VC
- 30S ribosomal protein S11
- Chain ZC
- 30S ribosomal protein S15
Coloring options: