J3_6BOK_039
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 6BOK|1|EB|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_039 not in the Motif Atlas
- Homologous match to J3_7RQB_002
- Geometric discrepancy: 0.0572
- The information below is about J3_7RQB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84625.2
- Basepair signature
- cWW-F-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
6BOK|1|EB|A|56
6BOK|1|EB|C|57
*
6BOK|1|EB|G|70
6BOK|1|EB|A|71
6BOK|1|EB|U|72
6BOK|1|EB|A|73
6BOK|1|EB|A|74
6BOK|1|EB|G|75
6BOK|1|EB|C|76
*
6BOK|1|EB|G|110
6BOK|1|EB|A|111
6BOK|1|EB|U|112
6BOK|1|EB|G|113
6BOK|1|EB|U|114
Current chains
- Chain EB
- 23S ribosomal RNA
Nearby chains
- Chain CC
- 50S ribosomal protein L29
- Chain HC
- 50S ribosomal protein L34
- Chain XB
- 50S ribosomal protein L23
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