J3_6BOK_056
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UAAAC*GGGUCGUG*CG
- Length
- 15 nucleotides
- Bulged bases
- 6BOK|1|B|U|271|||D
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_056 not in the Motif Atlas
- Homologous match to J3_9DFE_005
- Geometric discrepancy: 0.1402
- The information below is about J3_9DFE_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97971.2
- Basepair signature
- cWW-F-F-tSH-cSH-tWH-tWS-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
6BOK|1|B|U|269
6BOK|1|B|A|270|||A
6BOK|1|B|A|270|||B
6BOK|1|B|A|270|||C
6BOK|1|B|C|270|||D
*
6BOK|1|B|G|270|||X
6BOK|1|B|G|270|||Y
6BOK|1|B|G|270|||Z
6BOK|1|B|U|271|||A
6BOK|1|B|C|271|||B
6BOK|1|B|G|271|||C
6BOK|1|B|U|271|||D
6BOK|1|B|G|271
*
6BOK|1|B|C|366
6BOK|1|B|G|370
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L9
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