J3_6BY1_013

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

6BY1|1|AA|U|1240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|AA|C|1237
6BY1|1|AA|A|1238
6BY1|1|AA|A|1239
6BY1|1|AA|U|1240
6BY1|1|AA|G|1241
*
6BY1|1|AA|C|1296
6BY1|1|AA|G|1297
6BY1|1|AA|U|1298
6BY1|1|AA|A|1299
6BY1|1|AA|G|1300
6BY1|1|AA|U|1301
6BY1|1|AA|C|1302
6BY1|1|AA|C|1303
6BY1|1|AA|G|1304
6BY1|1|AA|G|1305
6BY1|1|AA|A|1306
6BY1|1|AA|U|1307
6BY1|1|AA|U|1308
*
6BY1|1|AA|A|1329
6BY1|1|AA|U|1330
6BY1|1|AA|G|1331
6BY1|1|AA|A|1332
6BY1|1|AA|A|1333
6BY1|1|AA|G|1334
6BY1|1|AA|U|1335
6BY1|1|AA|C|1336
6BY1|1|AA|G|1337

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AM

30S ribosomal protein S13

Chain AS

30S ribosomal protein S19