J3_6BY1_050

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CUAAUC*GAGGUUAG*CAUAAG

Length

20 nucleotides

Bulged bases

6BY1|1|DA|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|DA|C|2295
6BY1|1|DA|U|2296
6BY1|1|DA|A|2297
6BY1|1|DA|A|2298
6BY1|1|DA|U|2299
6BY1|1|DA|C|2300
*
6BY1|1|DA|G|2316
6BY1|1|DA|A|2317
6BY1|1|DA|G|2318
6BY1|1|DA|G|2319
6BY1|1|DA|U|2320
6BY1|1|DA|U|2321
6BY1|1|DA|A|2322
6BY1|1|DA|G|2323
*
6BY1|1|DA|C|2332
6BY1|1|DA|A|2333
6BY1|1|DA|U|2334
6BY1|1|DA|A|2335
6BY1|1|DA|A|2336
6BY1|1|DA|G|2337

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain BW

Transfer RNA; tRNA

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DF

50S ribosomal protein L5

Chain DO

50S ribosomal protein L18

Chain DW

50S ribosomal protein L27