3D structure

PDB id
6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli pH03H9 complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.94 Å

Loop

Sequence
UA*UACCGGUGGC*GCGG
Length
16 nucleotides
Bulged bases
6BY1|1|AA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BY1|1|AA|U|672
6BY1|1|AA|A|673
*
6BY1|1|AA|U|717
6BY1|1|AA|A|718
6BY1|1|AA|C|719
6BY1|1|AA|C|720
6BY1|1|AA|G|721
6BY1|1|AA|G|722
6BY1|1|AA|U|723
6BY1|1|AA|G|724
6BY1|1|AA|G|725
6BY1|1|AA|C|726
*
6BY1|1|AA|G|731
6BY1|1|AA|C|732
6BY1|1|AA|G|733
6BY1|1|AA|G|734

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AO
30S ribosomal protein S15
Chain AR
30S ribosomal protein S18
Chain AX
Messenger RNA
Chain CC
50S ribosomal protein L2

Coloring options:

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