J3_6BY1_058

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUACGUUCCC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|AA|G|933
6BY1|1|AA|C|934
6BY1|1|AA|A|935
6BY1|1|AA|C|936
6BY1|1|AA|A|937
6BY1|1|AA|A|938
6BY1|1|AA|G|939
*
6BY1|1|AA|C|1344
6BY1|1|AA|U|1345
6BY1|1|AA|A|1346
6BY1|1|AA|G|1347
6BY1|1|AA|U|1348
6BY1|1|AA|A|1349
6BY1|1|AA|A|1350
*
6BY1|1|AA|U|1372
6BY1|1|AA|G|1373
6BY1|1|AA|A|1374
6BY1|1|AA|A|1375
6BY1|1|AA|U|1376
6BY1|1|AA|A|1377
6BY1|1|AA|C|1378
6BY1|1|AA|G|1379
6BY1|1|AA|U|1380
6BY1|1|AA|U|1381
6BY1|1|AA|C|1382
6BY1|1|AA|C|1383
6BY1|1|AA|C|1384

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AW

Transfer RNA; tRNA

Chain AX

Messenger RNA

Chain AY

Transfer RNA; tRNA