3D structure

PDB id
6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli pH03H9 complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.94 Å

Loop

Sequence
UAUC*GAGACUGC*GAGGAAGGUG
Length
22 nucleotides
Bulged bases
6BY1|1|BA|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BY1|1|BA|U|1116
6BY1|1|BA|A|1117
6BY1|1|BA|U|1118
6BY1|1|BA|C|1119
*
6BY1|1|BA|G|1154
6BY1|1|BA|A|1155
6BY1|1|BA|G|1156
6BY1|1|BA|A|1157
6BY1|1|BA|C|1158
6BY1|1|BA|U|1159
6BY1|1|BA|G|1160
6BY1|1|BA|C|1161
*
6BY1|1|BA|G|1175
6BY1|1|BA|A|1176
6BY1|1|BA|G|1177
6BY1|1|BA|G|1178
6BY1|1|BA|A|1179
6BY1|1|BA|A|1180
6BY1|1|BA|G|1181
6BY1|1|BA|G|1182
6BY1|1|BA|U|1183
6BY1|1|BA|G|1184

Current chains

Chain BA
16S ribosomal RNA

Nearby chains

Chain BB
30S ribosomal protein S2
Chain BG
30S ribosomal protein S7
Chain BI
30S ribosomal protein S9
Chain BJ
30S ribosomal protein S10
Chain BN
30S ribosomal protein S14

Coloring options:

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