J3_6BY1_075

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GGAAC*GUUGAU*AAUGAACC

Length

19 nucleotides

Bulged bases

6BY1|1|CA|U|2833, 6BY1|1|CA|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|CA|G|2811
6BY1|1|CA|G|2812
6BY1|1|CA|A|2813
6BY1|1|CA|A|2814
6BY1|1|CA|C|2815
*
6BY1|1|CA|G|2831
6BY1|1|CA|U|2832
6BY1|1|CA|U|2833
6BY1|1|CA|G|2834
6BY1|1|CA|A|2835
6BY1|1|CA|U|2836
*
6BY1|1|CA|A|2882
6BY1|1|CA|A|2883
6BY1|1|CA|U|2884
6BY1|1|CA|G|2885
6BY1|1|CA|A|2886
6BY1|1|CA|A|2887
6BY1|1|CA|C|2888
6BY1|1|CA|C|2889

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L32

Chain CD

50S ribosomal protein L3

Chain CN

50S ribosomal protein L17

Chain CS

50S ribosomal protein L22