3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GC*GUGAAAAG*CC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6BZ6_041 not in the Motif Atlas
Homologous match to J3_7RQB_001
Geometric discrepancy: 0.0648
The information below is about J3_7RQB_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_65070.3
Basepair signature
cWW-tWH-cWW-tSH-F-cWW-F
Number of instances in this motif group
4

Unit IDs

6BZ6|1|YA|G|30
6BZ6|1|YA|C|31
*
6BZ6|1|YA|G|474
6BZ6|1|YA|U|475
6BZ6|1|YA|G|476
6BZ6|1|YA|A|477
6BZ6|1|YA|A|478
6BZ6|1|YA|A|479
6BZ6|1|YA|A|480
6BZ6|1|YA|G|481
*
6BZ6|1|YA|C|509
6BZ6|1|YA|C|510

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YU
50S ribosomal protein L20
Chain YW
50S ribosomal protein L22
Chain YY
50S ribosomal protein L24

Coloring options:


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