J3_6BZ7_078

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UAAAC*GGGUCGUG*CG

Length

15 nucleotides

Bulged bases

6BZ7|1|YA|C|271|||A, 6BZ7|1|YA|U|271|||C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ7_078 not in the Motif Atlas

Homologous match to J3_9DFE_005

Geometric discrepancy: 0.1588

The information below is about J3_9DFE_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97971.2

Basepair signature

cWW-F-F-tSH-cSH-tWH-tWS-cWW-F-cWW

Number of instances in this motif group

3

Unit IDs

6BZ7|1|YA|U|269
6BZ7|1|YA|A|270
6BZ7|1|YA|A|270|||A
6BZ7|1|YA|A|270|||B
6BZ7|1|YA|C|270|||C
*
6BZ7|1|YA|G|270|||W
6BZ7|1|YA|G|270|||X
6BZ7|1|YA|G|270|||Y
6BZ7|1|YA|U|270|||Z
6BZ7|1|YA|C|271|||A
6BZ7|1|YA|G|271|||B
6BZ7|1|YA|U|271|||C
6BZ7|1|YA|G|271
*
6BZ7|1|YA|C|366
6BZ7|1|YA|G|370

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YI

50S ribosomal protein L9