3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
UGGA*UAC*GGAA
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6BZ8_005 not in the Motif Atlas
Homologous match to J3_4LFB_003
Geometric discrepancy: 0.0897
The information below is about J3_4LFB_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_52655.4
Basepair signature
cWW-tSH-cWW-F-cWW-cWW
Number of instances in this motif group
4

Unit IDs

6BZ8|1|QA|U|943
6BZ8|1|QA|G|944
6BZ8|1|QA|G|945
6BZ8|1|QA|A|946
*
6BZ8|1|QA|U|1235
6BZ8|1|QA|A|1236
6BZ8|1|QA|C|1237
*
6BZ8|1|QA|G|1337
6BZ8|1|QA|G|1338
6BZ8|1|QA|A|1339
6BZ8|1|QA|A|1340

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QG
30S ribosomal protein S7
Chain QI
30S ribosomal protein S9
Chain QM
30S ribosomal protein S13
Chain QU
30S ribosomal protein Thx
Chain QV
Transfer RNA; tRNA
Chain QW
Transfer RNA; tRNA

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