J3_6CAE_013
3D structure
- PDB id
- 6CAE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CAC*GGUAAG*CGAGG
- Length
- 14 nucleotides
- Bulged bases
- 6CAE|1|1A|A|2803
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6CAE_013 not in the Motif Atlas
- Homologous match to J3_7RQB_013
- Geometric discrepancy: 0.0815
- The information below is about J3_7RQB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_24416.1
- Basepair signature
- cWW-F-F-tWH-cWW-F-tHS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6CAE|1|1A|C|2802
6CAE|1|1A|A|2803
6CAE|1|1A|C|2804
*
6CAE|1|1A|G|2816
6CAE|1|1A|G|2817
6CAE|1|1A|U|2818
6CAE|1|1A|A|2819
6CAE|1|1A|A|2820
6CAE|1|1A|G|2821
*
6CAE|1|1A|C|2899
6CAE|1|1A|G|2900
6CAE|1|1A|A|2901
6CAE|1|1A|G|2902
6CAE|1|1A|G|2903
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1E
- 50S ribosomal protein L3
- Chain 1W
- 50S ribosomal protein L22
Coloring options: