J3_6CAO_019
3D structure
- PDB id
- 6CAO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosomal decoding complex at ambient temperature
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- CGC*GGACUGC*GAGGAAGGAG
- Length
- 20 nucleotides
- Bulged bases
- 6CAO|1|A|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6CAO_019 not in the Motif Atlas
- Homologous match to J3_4LFB_018
- Geometric discrepancy: 0.0565
- The information below is about J3_4LFB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6CAO|1|A|C|1116
6CAO|1|A|G|1117
6CAO|1|A|C|1118
*
6CAO|1|A|G|1155
6CAO|1|A|G|1156
6CAO|1|A|A|1157
6CAO|1|A|C|1158
6CAO|1|A|U|1159
6CAO|1|A|G|1160
6CAO|1|A|C|1161
*
6CAO|1|A|G|1175
6CAO|1|A|A|1176
6CAO|1|A|G|1177
6CAO|1|A|G|1178
6CAO|1|A|A|1179
6CAO|1|A|A|1180
6CAO|1|A|G|1181
6CAO|1|A|G|1182
6CAO|1|A|A|1183
6CAO|1|A|G|1184
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain I
- 30S ribosomal protein S9
- Chain N
- 30S ribosomal protein S14 type Z
Coloring options: