J3_6CB1_004
3D structure
- PDB id
- 6CB1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast nucleolar pre-60S ribosomal subunit (state 3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CGAAGAACG*CC*GAGUAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6CB1|1|1|C|949
6CB1|1|1|G|950
6CB1|1|1|A|951
6CB1|1|1|A|952
6CB1|1|1|G|1157
6CB1|1|1|A|1158
6CB1|1|1|A|1159
6CB1|1|1|C|1160
6CB1|1|1|G|1161
*
6CB1|1|1|C|1338
6CB1|1|1|C|1339
*
6CB1|1|1|G|1365
6CB1|1|1|A|1366
6CB1|1|1|G|1367
6CB1|1|1|U|1368
6CB1|1|1|A|1369
6CB1|1|1|G|1370
Current chains
- Chain 1
- 35S pre-ribosomal RNA miscRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain e
- 60S ribosomal protein L32
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