J3_6CZR_002
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 6CZR|1|1A|A|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6CZR_002 not in the Motif Atlas
- Homologous match to J3_7RQB_002
- Geometric discrepancy: 0.0838
- The information below is about J3_7RQB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84625.2
- Basepair signature
- cWW-F-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
6CZR|1|1A|A|54
6CZR|1|1A|C|55
*
6CZR|1|1A|G|68
6CZR|1|1A|A|69
6CZR|1|1A|U|70
6CZR|1|1A|A|71
6CZR|1|1A|A|72
6CZR|1|1A|G|73
6CZR|1|1A|C|74
*
6CZR|1|1A|G|107
6CZR|1|1A|A|108
6CZR|1|1A|U|109
6CZR|1|1A|G|110
6CZR|1|1A|U|111
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 12
- 50S ribosomal protein L29
- Chain 17
- 50S ribosomal protein L34
- Chain 1X
- 50S ribosomal protein L23
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