3D structure

PDB id
6CZR (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of amicetin bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CGUCAG*CGCAACC*GACGACG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_08394.2
Basepair signature
cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
Number of instances in this motif group
3

Unit IDs

6CZR|1|1a|C|1046
6CZR|1|1a|G|1047
6CZR|1|1a|U|1048
6CZR|1|1a|C|1049
6CZR|1|1a|A|1050
6CZR|1|1a|G|1051
*
6CZR|1|1a|C|1090
6CZR|1|1a|G|1091
6CZR|1|1a|C|1092
6CZR|1|1a|A|1093
6CZR|1|1a|A|1094
6CZR|1|1a|C|1095
6CZR|1|1a|C|1096
*
6CZR|1|1a|G|1169
6CZR|1|1a|A|1170
6CZR|1|1a|C|1171
6CZR|1|1a|G|1172
6CZR|1|1a|A|1173
6CZR|1|1a|C|1174
6CZR|1|1a|G|1175

Current chains

Chain 1a
16S Ribosomal RNA

Nearby chains

Chain 1c
30S ribosomal protein S3
Chain 1e
30S ribosomal protein S5
Chain 1g
30S ribosomal protein S7
Chain 1i
30S ribosomal protein S9
Chain 1j
30S ribosomal protein S10
Chain 1n
30S ribosomal protein S14 type Z

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.5513 s